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2016

Evolutionary engineering reveals divergent paths when yeast is adapted to different acidic environments. Metabolic Engineering. 2016.

NCG 5.0: updates of a manually curated repository of cancer genes and associated properties from cancer mutational screenings. Nucleic Acids Research. 2016, 44(D1):D992-D999.

ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization. Molecular BioSystems. 2016, 12(2):477-479.

2015

The estrous cycle surpasses sex differences in regulating the transcriptome in the rat medial prefrontal cortex and reveals an underlying role of early growth response 1. Genome Biology. 2015, 16:256.

Relationships between predicted moonlighting proteins, human diseases, and comorbidities from a network perspective. Frontiers in Physiology. 2015, 6:171.

ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparision and visualization. Bioinformatics. 2015, 31(14):2382-2383.

DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics. 2015, 31(4):608-609.