Guangchuang’s repo for R packages

I have developed 6 packages on CRAN and 8 on Bioconductor. For CRAN packages, you can use install.packages() to install them directly and for Bioconductor packages, you need to follow the guide on package homepage by using biocLite() to install.

If you are interesting, please visit their homepage to learn more.

• CRAN
  • badger: Badge for R Package
  • dlstats: Download Stats of R Packages
  • emojifont: Emoji and Font Awesome in Graphics
  • ggimage: Use Image in ‘ggplot2’
  • rvcheck: R/Package Version Check
  • scatterpie: Scatter Pie Plot

• Bioconductor
  • ChIPseeker: ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
  • clusterProfiler: statistical analysis and visualization of functional profiles for genes and gene clusters
  • DOSE: Disease Ontology Semantic and Enrichment analysis
  • ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
  • GOSemSim: GO-terms Semantic Similarity Measures
  • meshes: MeSH Enrichment and Semantic analyses
  • ReactomePA: Reactome Pathway Analysis
  • treeio: Base Classes and Functions for Phylogenetic Tree Input and Output

This repo is mainly for my R packages that only hosted on github.

repo = c("https://cran.rstudio.com",
         "https://bioconductor.org/packages/release/bioc",
         "https://guangchuangyu.github.io/drat")

install.packages("scatterpie", repo=repo)

install.packages("seqcombo", repo=repo)

install.packages("seqmagick", repo=repo)