Tweets
Free silhouette images for phylogenetic trees found trough the ggtree vignette: https://t.co/PdDtAB0nVN
— Valentina Galata (@GalataValentina) March 12, 2018
The R-packages from Guangchuan Yu are so extremely useful - ggtree, clusterProfiler, GOSemSim, DOSE - can we please collect them and call it the Yu-niverse?
— Philipp Bayer (@PhilippBayer) February 23, 2018
Combine #ggtree + #plotly to make a quick interactive #phylogenetic tree in #rstat. Gist: https://t.co/ymziVXMnmY #bioinformatics #evolution pic.twitter.com/oIhrWJa5cy
— Anders G da Silva (@drandersgs) February 20, 2018
I am having too much fun playing with ggtree, I might never edit a phylogenetic tree using Illustrator again!
— Miles Zhang (@ymilesz) February 2, 2018
Didn't anticipate having to rewrite a function, but got there in the end #ggtree #rstats pic.twitter.com/SD1WpZ0sx6
— Tegan Harris (@DoctorTegs) February 1, 2018
This time I kept it all in R and used ggtree https://t.co/G1dRHsCFPL, though both plotTree and ggtree can make this style of figure.
— Zoe Anne Dyson (@msmicrobiocode) January 22, 2018
Was just about to shout out at #ggtree and saw your tweet on the top of my newsfeed. #ggtree - where have you been all my life?
— Erin Becker (@ErinSBecker) November 20, 2017
Drawing a tree with colored tips in R (ggtree)
— Gavin Guanyang Zhang 张冠阳 (@GYZhang2) December 13, 2017
https://t.co/s9FYUbynCd @guangchuangyu
ggtree使ってみた。”注目する枝組み合わせの分布”みたいなものを可視化したいんだけどまだちょっと見にくい。 pic.twitter.com/w5xs7cd0jQ
— Kenji Fukushima (@kfuku0502) December 13, 2017
ggtreeにはhttps://t.co/8T3WU8h9pWからシルエット画像を取ってくる用の関数まで用意されているのか…。HGTの描画も楽そうだし、これはもう系統樹描画に関してはETEを投げ捨ててggtreeに鞍替えするべきか。https://t.co/gynekuwjCe
— Kenji Fukushima (@kfuku0502) December 11, 2017
I've had good experiences with ggtree https://t.co/eRLhDoc4Hm
— Philipp Bayer (@PhilippBayer) December 7, 2017
Thank you so much @guangchuangyu! #ggtree is the easy way for my phd data analysis <3 love it!
— Francisco Romero (@pinchehippie) October 17, 2017
Now on https://t.co/50tYJLLZqc - a spotlight on the Top Tools for R Programming:
— LabWorm (@TheLabWorm) September 27, 2017
ggtree made the list!https://t.co/YQv7FeegpM pic.twitter.com/hGn7nBfbEJ
geom_hilight_encircle for unrooted layout #ggtree #rstats pic.twitter.com/1wIwgwUduf
— Guangchuang Yu (@guangchuangyu) September 12, 2017
New Post: Plotting a Sequential Binary Partition on a Tree in R @alex_washburne @guangchuangyu https://t.co/6jQKMof5aW
— Justin Silverman (@inschool4life) September 21, 2017
The ggtree package looks like a cool way to visualize hierarchical datahttps://t.co/spsqLkqeVG pic.twitter.com/GRODlrBahW
— Nathan Brouwer (@lobrowR) August 21, 2017
Possible to combine #ggjoy with #ggtree ? My gg-fu is weak. #rstats #DataViz #JoyPlot https://t.co/4FICfER6Oa
— Libby Megna (@LibbyMegna) July 29, 2017
Second post with an update on how to add tip shapes and colours to ggtree https://t.co/ezWF4TVQst
— Anthony Underwood (@bioinformAnt) July 7, 2017
Yes and no. No manual assignment => randomly assigned colours. Even with manual spec ggtree is still much quicker than making fig by hand 😀
— Anthony Underwood (@bioinformAnt) July 7, 2017
I'd use ggtree from Bioconductor as you can really tailor all the fonts etc..https://t.co/NAcbFswGYB
— Susan Holmes (@SherlockpHolmes) June 21, 2017
How phylogenies and associated heatmaps can be drawn using the #ggtree package in #R https://t.co/rlBvGxUEBO
— L. Rosaleny (@lorelai66) June 16, 2017
I think most use a combination of icandy/itol/phandango. I prefer ggtree, which you can code and customise in R.
— Mat Beale (@typeMAT12) June 5, 2017
You like emijo & #RStats ? Then check this out! phylomoji with ggtree and emojifont : https://t.co/9BcZhjfkXm pic.twitter.com/pP1aMPRozS
— ThinkR (@thinkR_fr) May 24, 2017
as someone who doesn't build a lot of trees, but does a lot of #Rstats —#ggtree is SO GREAT https://t.co/ABe3TsIVPR
— Sean Leonard (@spleonard1) April 27, 2017
@guangchuangyu by the way our new paper used ggtree! Thanks for your hard work! https://t.co/mXD6E0Ddt0
— Justin Silverman (@inschool4life) March 10, 2017
I cannot get over how beautiful the graphics produced by GGTREE are. Cannot wait to use it! https://t.co/8qFO9yKLlp
— Mark D. Scherz (@MarkScherz) March 9, 2017
Plot beautiful phylogenies and illustrate them with @PhyloPic images, with ggtree https://t.co/i9lsp5W6mL pic.twitter.com/mA8hygAgSG
— Molecular Ecologist (@molecologist) February 10, 2017
OMG SO USEFUL! "Phylogenetic trees in R using ggtree" https://t.co/Yr8HNdWXV0
— Stephen Taerum (@BrahStevovo) February 8, 2017
I like ggtree to plot phylogenetic trees and annotate them. And I haven't found any other tools as customizable as ggtree
— Matthias Grenié (@LeNematode) January 25, 2017
The R @Bioconductor package #ggtree is now published in @MethodsEcolEvol https://t.co/6fvSRQo2CC #evomics2017 pic.twitter.com/Dwq1DD84A2
— Elin Videvall (@ElinVidevall) January 20, 2017
Assortative tip coloring by text string using #ggtree by @guangchuangyu https://t.co/rocvFK3OOS #phylogenetics pic.twitter.com/mEMkhZ2fVk
— Gavin Guanyang Zhang 张冠阳 (@GYZhang2) December 21, 2016
Featured this week: ggtree, an R package for visualization & annotation of phylogenetic trees. Like it? Vote it up! https://t.co/laxtuRQDGB pic.twitter.com/zDvEBysWSQ
— LabWorm (@TheLabWorm) December 21, 2016
+1 for ggtree, can make some very pretty figures.
— Will Allen (@wl_allen) November 11, 2016
I'm worried by how excited I am about having a whole 8 hour flight to work on some #rstats. Going to teach myself ggtree first...
— Natalie Cooper (@nhcooper123) November 11, 2016
I use ggtree in R, which uses ggplot2 language. Easy to edit and produces nice figures
— James Doonan (@clydeandforth1) November 3, 2016
Adaptive radiation of #Darwin's finches showing #genotypic and #morphometric evolution. Good excuse to practice with #ggtree @guangchuangyu pic.twitter.com/JJZ3Yje58s
— Will Harvey (@_wharvey) February 15, 2017
am quite liking #ggtree #rstats #ggplot pic.twitter.com/hvywS2z4ps
— Nick Ilott (@IlottNick) October 19, 2016
Treespace visualization of a heuristic best tree search in #R package #ggtree #phylogenetics pic.twitter.com/hnSJpIABql
— Alejandro Damian-Serrano (@antropoteuthis) January 29, 2016
@guangchuangyu Updated to latest #ggtree and #ggplot2 and very impressed! Any ideas on using geom_label with tip labels to add box/fill?
— Jo Williams-Newkirk (@ajwnewkirk) January 25, 2016
If you’re not using ggtree by @guangchuangyu for your trees in R then you should be! #rstats #bioinformaticshttps://t.co/Z8HdLeyiIg
— Matt Workentine (@mworkentine) January 5, 2016
@guangchuangyu #ggtree has actually changed my life! it is #awesome! #RePlottingEveryTreeFigureEver #ggplot2
— Peter Cowman (@pete_cowman) November 13, 2015
I continue to be amazed by the speed and quality of support @guangchuangyu provides for #ggtree #rstats
— Jo Williams-Newkirk (@ajwnewkirk) November 10, 2015
@tylerrinker really appreciate all of @guangchuangyu efforts with #ggtree; extends well beyond its original intent; love it
— timelyportfolio (@timelyportfolio) September 3, 2015
@guangchuangyu I even used #ggtree!
— Simon Frost (@sdwfrost) December 1, 2015
@minisciencegirl Yep we use it mainly for that... there's a more featured version in https://t.co/5oOeLwx2Hg but I need to switch to ggtree!
— Kat Holt (@DrKatHolt) November 19, 2015
Sent my first #rstats #shiny app off to be alpha tested by a colleague today. Wouldn't be possible without #ggtree.
— Jo Williams-Newkirk (@ajwnewkirk) October 31, 2015
@genetics_blog Thanks. We have turned this into a shiny app too, but need to iron out some bugs... Also, try the new ggtree library!
— Kat Holt (@DrKatHolt) September 8, 2015
@guangchuangyu My bad :( It's working perfectly fine. Thanks so much for an awesome #rstats #ggplot2 package ggtree! pic.twitter.com/ofmzyOWe9C
— Ahmed Moustafa (@AhmedMoustafa) January 26, 2015
@guangchuangyu A bit improved version :) pic.twitter.com/TZTSBK5aSm
— Ahmed Moustafa (@AhmedMoustafa) January 26, 2015
I wish this guy was my student! @guangchuangyu Sure, it won't get a Nature or Science paper, but who cares? http://t.co/XnA7uaFVms
— Simon Frost (@sdwfrost) January 31, 2015
@CieraReports ggtree is a cool package that is based on the drawing of ggplot2 https://t.co/gFPHSdGAj1
— Uryu Shinya (@u_ribo) January 26, 2015
#ggtree https://t.co/VFrKCcz0DI is a pretty powerful #rstats #ggplot2 @Bioconductor pkg for neat #phylogenetic #dataviz by @guangchuangyu
— Ahmed Moustafa (@AhmedMoustafa) January 30, 2015
ggtree extends ggplot2 for phylogenetic trees. tons of documentation+examples: https://t.co/y9V52s2yWd #Rstats pic.twitter.com/Z9SDcueR2c
— Stephen Turner (@strnr) November 10, 2015
Need to visualize some trees? Recent #R package #ggtree looks quite interesting. https://t.co/EPaXIqmvDZ
— Sebastian Schmidt (@TSBSchm) November 11, 2015
@flashton2003 world of possibilities now! Also looking at ggtree (ggplot2 expansion) for future stuff - that looks really cool too
— David W. Cleary (@Bacterioskeptic) November 20, 2015
time for you to learn #rstats @LAevolving <- @StephSpiel new #Rstats package ggtree @ggplot2 https://t.co/DFmKGyTVwE pic.twitter.com/WRBZHlRsIa
— Salamanda (@ajzellmer) November 10, 2015
V. cool new #Rstats package ggtree, addon 2 @ggplot2, for automating tree drawing/annotating https://t.co/k3eSdVKp9C pic.twitter.com/nH8SKSaXaN
— Stephanie Spielman (@stephspiel) November 9, 2015
Can’t wait to try. MT @genetics_blog: ggtree extends ggplot2 for phylogenetic trees: https://t.co/JuThXlHUjz #Rstats pic.twitter.com/OmAzGghvqB
— Kent Holsinger (@keholsinger) November 19, 2015
@guangchuangyu Excited to discover #ggtree; fills a lot of holes in my workflow but not seeing how to add bootstrap from ape?
— Jo Williams-Newkirk (@ajwnewkirk) September 6, 2015
ggtree added cool features, My favorite is the one from BEAST output https://t.co/3WOLxfTzRp
— Manvendra Singh (@manvendr7) November 11, 2015
ggtree looks useful: nice viz and annotations of phylogenetic trees with ggplot #rstats http://t.co/lbNKw3qIDI thanks @guangchuangyu
— Julia Gustavsen (@JuliaGustavsen) August 9, 2015
ggtree - looks like a very useful phylogenetic tree plotting package for R based on ggplot2 (https://t.co/UCXVVmG5W7)
— Simon J Greenhill (@SimonJGreenhill) December 23, 2014
Plot trees & annotation (incl BEAST, time axis) with ggtree for R!http://t.co/9ahqKQLTaI
— Kat Holt (@DrKatHolt) June 15, 2015
Well spotted @mackas21 pic.twitter.com/2ldvAiH2fj